The free article The Enterprise Side of JavaFX: Part Two describes pragmatic encapsulation and structure of a real world JavaFX application: LighView. It is all about charts, HTML integration and data binding.
The first part of the series is about Maven build and RESTful backends.
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Classic Java EE 7 Workshops: Bootstrap, Effective and Architectures, July, 13th-15th
Online workshop: Java EE 7 Bootstrap